Welcome to the MGHPCC Virtual Booth

Boston University

Computational Modeling of Biological Systems

The Cui Group makes extensive use of BU’s Shared Computing Cluster as it tackles some of the most challenging and exciting problems in molecular biophysics.

The Cui Group at Boston University, led by Qiang Cui, focuses on developing and applying computational modeling techniques to study complex biological systems at the molecular level. Their research spans a wide range of topics, including enzyme catalysis, protein dynamics, and biomolecular interactions, with a particular emphasis on understanding the fundamental principles that govern biological processes.

A key area of the Cui Group’s work involves the use of quantum mechanics and molecular mechanics hybrid methods to explore enzyme reactions and energy landscapes. These computational techniques allow the group to investigate the atomic-level mechanisms underlying enzyme catalysis and to predict how structural changes in proteins impact their function. By modeling reaction pathways, the group can provide valuable insights into how enzymes work and how they might be manipulated for applications in biotechnology or drug development.

The group also employs advanced molecular dynamics simulations to study protein conformational changes and interactions with other biomolecules, such as ligands or inhibitors. Their computational models provide a detailed picture of molecular motion and energy transfer within biological systems, offering a powerful tool for understanding complex biological phenomena. The Cui Group’s computational research contributes to a deeper understanding of molecular biology, with applications in biochemistry, pharmacology, and bioengineering.

Learn more
Qiang Cui
Professor in the Departments of Chemistry, Physics, and Biomedical Engineering, Boston University

PRINCIPAL MEMBERS

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Featured projects

A Future of Unmanned Aerial Vehicles
ACAS X: A Family of Next-Generation Collision Avoidance Systems
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Accelerating Rendering Power
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ACCESS Support (MATCH)
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Adaptive Deep Learning Systems Towards Edge Intelligence
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Analyzing the Gut Microbiome
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Ask.CI
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Avoiding Smash Hits
Research Computing Center
BU Research Computing Services
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Campus Champions
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Computational Modeling of Biological Systems
Computational Molecular Ecology
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ConnectCI
Cyber-Physical Communication Network Security
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Dancing Frog Genomes
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Deciphering Alzheimer's Disease
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Denser Environments Cultivate Larger Galaxies
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Detecting Protein Concentrations in Assays
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Developing Advanced Materials for a Sustainable Energy Future
SC24 Project
Dexterous Robotic Hands
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Discovering Evolution’s Master Switches
MGHPCC Project
Ecosystem for Research Networking (ERN)
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Electron Heating in Kinetic-Alfvén-Wave Turbulence
Energy Transport and Ultrafast Spectroscopy Lab
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Ephemeral Stream Water Contributions to US Drainage Networks
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Evaluating Health Benefits of Stricter US Air Quality Standards
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Evolution of Viral Infectious Disease
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Exact Gravitational Lensing by Rotating Black Holes
MGHPCC Project
Expanding Computing Education Pathways (ECEP) Alliance
SC24 Project
Fuzzing the Linux Kernel
Genome Forecasting
SC24 Project
Global Consequences of Warming-Induced Arctic River Changes
Harvard FASRC
MGHPCC Project
Holyoke Codes: Broadening Participation in Computer Science Education
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IceCube: Hunting Neutrinos
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Impact of Marine Heatwaves on Coral Diversity
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Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
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Knowledge Base
Lincoln Laboratory Supercomputing Center (LLSC)
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Measuring Neutrino Mass
MIT Brain and Cognitive Sciences
Research Computing Center
MIT Office of Research Computing and Data
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Modeling Breast Cancer Spread
SC24 Project
Modeling Hydrogels and Elastomers
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Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
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Network Attached FPGAs in the OCT
Research Computing Center
NEU Research Computing
NeuraChip
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Neurocognition at the Wu Tsai Institute, Yale
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New England Research Cloud
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New Insights on Binary Black Holes
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Northeast Storage Exchange
Open Cloud Testbed (OCT)
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OSN 1 - Accessing Storage
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OSN 2 - Deploying Storage
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Pulling Back the Quantum Curtain on ‘Weyl Fermions’
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Quantum Computing in Renewable Energy Development
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QuEra at the MGHPCC
Remote Sensing of Earth Systems
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Revolutionizing Materials Design with Computational Modeling
SEQer - Sequence Evaluation in Realtime
Simulating Large Biomolecular Assemblies
Social Capital and Economic Mobility
Software for Unreliable Quantum Computers
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Studying Highly Efficient Biological Solar Energy Systems
SC24 Project
Surface Behavior
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Taming the Energy Appetite of AI Models
SC24 Project
The Institute for Experiential AI
SC24 Project
The Kempner Institute - Unlocking Intelligence
MGHPCC Project
The Mass Open Cloud Alliance (MOC Alliance)
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
SC24 Project
The US ATLAS Northeast Tier 2 Center
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Tornado Path Detection
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Towards a Whole Brain Cellular Atlas
UMass - URI Unity Cluster
Research Computing Center
UMass Amherst Research Computing and Data
URI Center for Computational Research
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Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
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Yale Budget Lab
Research Computing Center
Yale Center for Research Computing
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