Welcome to the MGHPCC Virtual Booth

Smith College

Dancing Frog Genomes

The foot-flagging frog Staurois parvus
The Mangiamele Lab uses MGHPCC computers to study how animal behavior evolves. Their work integrates techniques from physiology, neurobiology, genomics and transcriptomics to understand the evolution of communication signals in frogs and fish.

Mangiamele is particularly interested in "foot-flagging," a unique communication behavior in Bornean frogs where males use their brightly colored webbed feet to attract mates and deter rivals. By studying the genomes of foot-flagging frogs and comparing them to non-foot-flagging species, her team investigates how hormones influence behavioral evolution.​ Last year, her team used Boston University's Shared Computer Cluster for their transcriptomic analysis of Bornean frog tadpoles at different developmental stages, examining gene expression to understand neural circuit changes related to foot-flagging. A recent paper on the first foot-flagging frog genome appeared in G3 Genes|Genomes|Genetics.

Learn more
Lisa Mangiamele
Associate Professor of Biological Sciences, Smith College

PRINCIPAL MEMBERS

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Featured projects

A Future of Unmanned Aerial Vehicles
ACAS X: A Family of Next-Generation Collision Avoidance Systems
SC24 Project
Accelerating Rendering Power
MGHPCC Project
ACCESS Support (MATCH)
SC24 Project
Adaptive Deep Learning Systems Towards Edge Intelligence
SC24 Project
Analyzing the Gut Microbiome
MGHPCC Project
Ask.CI
SC24 Project
Avoiding Smash Hits
Research Computing Center
BU Research Computing Services
MGHPCC Project
Campus Champions
SC24 Project
Computational Modeling of Biological Systems
Computational Molecular Ecology
MGHPCC Project
ConnectCI
Cyber-Physical Communication Network Security
SC24 Project
Dancing Frog Genomes
SC24 Project
Deciphering Alzheimer's Disease
SC24 Project
Denser Environments Cultivate Larger Galaxies
SC24 Project
Detecting Protein Concentrations in Assays
SC24 Project
Developing Advanced Materials for a Sustainable Energy Future
SC24 Project
Dexterous Robotic Hands
SC24 Project
Discovering Evolution’s Master Switches
MGHPCC Project
Ecosystem for Research Networking (ERN)
SC24 Project
Electron Heating in Kinetic-Alfvén-Wave Turbulence
Energy Transport and Ultrafast Spectroscopy Lab
SC24 Project
Ephemeral Stream Water Contributions to US Drainage Networks
SC24 Project
Evaluating Health Benefits of Stricter US Air Quality Standards
SC24 Project
Evolution of Viral Infectious Disease
SC24 Project
Exact Gravitational Lensing by Rotating Black Holes
MGHPCC Project
Expanding Computing Education Pathways (ECEP) Alliance
SC24 Project
Fuzzing the Linux Kernel
Genome Forecasting
SC24 Project
Global Consequences of Warming-Induced Arctic River Changes
Harvard FASRC
MGHPCC Project
Holyoke Codes: Broadening Participation in Computer Science Education
SC24 Project
IceCube: Hunting Neutrinos
SC24 Project
Impact of Marine Heatwaves on Coral Diversity
SC24 Project
Investigating Mantle Flow Through Analyses of Earthquake Wave Propagation
MGHPCC Project
Knowledge Base
Lincoln Laboratory Supercomputing Center (LLSC)
SC24 Project
Measuring Neutrino Mass
MIT Brain and Cognitive Sciences
Research Computing Center
MIT Office of Research Computing and Data
SC24 Project
Modeling Breast Cancer Spread
SC24 Project
Modeling Hydrogels and Elastomers
SC24 Project
Monte Carlo eXtreme (MCX) - a Physically-Accurate Photon Simulator
SC24 Project
Network Attached FPGAs in the OCT
Research Computing Center
NEU Research Computing
NeuraChip
SC24 Project
Neurocognition at the Wu Tsai Institute, Yale
MGHPCC Project
New England Research Cloud
SC24 Project
New Insights on Binary Black Holes
MGHPCC Project
Northeast Storage Exchange
Open Cloud Testbed (OCT)
MGHPCC Project
OSN 1 - Accessing Storage
MGHPCC Project
OSN 2 - Deploying Storage
SC24 Project
Pulling Back the Quantum Curtain on ‘Weyl Fermions’
SC24 Project
Quantum Computing in Renewable Energy Development
SC24 Project
QuEra at the MGHPCC
Remote Sensing of Earth Systems
SC24 Project
Revolutionizing Materials Design with Computational Modeling
SEQer - Sequence Evaluation in Realtime
Simulating Large Biomolecular Assemblies
Social Capital and Economic Mobility
Software for Unreliable Quantum Computers
SC24 Project
Studying Highly Efficient Biological Solar Energy Systems
SC24 Project
Surface Behavior
SC24 Project
Taming the Energy Appetite of AI Models
SC24 Project
The Institute for Experiential AI
SC24 Project
The Kempner Institute - Unlocking Intelligence
MGHPCC Project
The Mass Open Cloud Alliance (MOC Alliance)
The Rhode Island Coastal Hazards Analysis, Modeling, and Prediction System
SC24 Project
The US ATLAS Northeast Tier 2 Center
SC24 Project
Tornado Path Detection
SC24 Project
Towards a Whole Brain Cellular Atlas
UMass - URI Unity Cluster
Research Computing Center
UMass Amherst Research Computing and Data
URI Center for Computational Research
SC24 Project
Volcanic Eruptions Impact on Stratospheric Chemistry & Ozone
SC24 Project
Yale Budget Lab
Research Computing Center
Yale Center for Research Computing
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